Search results for "Correlation network analysis"

showing 3 items of 3 documents

Covariation and phenotypic integration in chemical communication displays: biosynthetic constraints and eco-evolutionary implications

2018

Chemical communication is ubiquitous. The identification of conserved structural elements in visual and acoustic communication is well established, but comparable information on chemical communication displays (CCDs) is lacking. We assessed the phenotypic integration of CCDs in a meta‐analysis to characterize patterns of covariation in CCDs and identified functional or biosynthetically constrained modules. Poorly integrated plant CCDs (i.e. low covariation between scent compounds) support the notion that plants often utilize one or few key compounds to repel antagonists or to attract pollinators and enemies of herbivores. Animal CCDs (mostly insect pheromones) were usually more integrated t…

0106 biological sciences0301 basic medicineEco evolutionaryanalysisPhysiologyPlant ScienceAnimal Breeding and GenomicsBiologyfloral scentsChemical communicationFloral scentsphenotypic integration010603 evolutionary biology01 natural sciencesChemical communication03 medical and health sciencesPhenotypic integrationbiosynthetic constraintsFokkerij en Genomicavegetative scentsLaboratory of Entomologycorrelation networkEcologyOrganic Chemistrychemical communicationPhenotypic integrationInsect pheromonesPE&RCLaboratorium voor Entomologiecorrelation network analysisOrganische ChemieCorrelation network analysisBiosynthetic constraints030104 developmental biologyEvolutionary biologyinternationalFloral scentIdentification (biology)EPSVegetative scentsNew Phytologist
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Metabolic Profiling and Metabolite Correlation Network Analysis Reveal That Fusarium solani Induces Differential Metabolic Responses in Lotus japonic…

2021

Root fungal endophytes are essential mediators of plant nutrition under mild stress conditions. However, variations in the rhizosphere environment, such as nutrient depletion, could result in a stressful situation for both partners, shifting mutualistic to nonconvenient interactions. Mycorrhizal fungi and dark septate endophytes (DSEs) have demonstrated their ability to facilitate phosphate (Pi) acquisition. However, few studies have investigated other plant–fungal interactions that take place in the root environment with regard to phosphate nutrition. In the present research work, we aimed to analyze the effect of extreme Pi starvation and the fungal endophyte Fusarium solani on the model …

Microbiology (medical)Fusariumphosphate starvationRhizospherebiologyQH301-705.5Lotus japonicusfungifood and beveragesPlant Sciencebiology.organism_classificationcorrelation network analysismetabolomicsNutrientMetabolomicsBotanyLotus tenuis<i>Fusarium solani</i><i>Lotus</i> spp.Biology (General)Fusarium solaniPlant nutritionEcology Evolution Behavior and SystematicsJournal of Fungi
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Transcriptional changes through menstrual cycle reveal a global transcriptional derepression underlying the molecular mechanism involved in the windo…

2021

The human endometrium is a dynamic tissue that only is receptive to host the embryo during a brief time in the middle secretory phase, called the window of implantation (WOI). Despite its importance, regulation of the menstrual cycle remains incompletely understood. The aim of this study was to characterize the gene cooperation and regulation of menstrual cycle progression, to dissect the molecular complexity underlying acquisition of endometrial receptivity for a successful pregnancy, and to provide the scientific community with detailed gene co-expression information throughout the menstrual cycle on a user-friendly web-tool database. A retrospective gene co-expression analysis was perfor…

Embryologysystems biology of the menstrual cycleTranscription Geneticendometrial receptivitymedia_common.quotation_subjectweighted gene correlation network analysis (WGCNA)BiologyCohort StudiesEndometriumgenetic regulation of menstrual cyclePregnancymicroRNAGeneticsHumansEmbryo ImplantationMolecular BiologyGeneTranscription factorgene co-expressionDerepressionMenstrual cycleMenstrual Cycletranscription factormedia_commonrecurrent implantation failuremicroRNAObstetrics and GynecologyGene Expression Regulation DevelopmentalEmbryoCell BiologyGene signatureCell biologyendometrial transcriptomicsnuclear hormone receptorReproductive MedicineNuclear receptorEmbryo LossFemaleTranscriptomeDevelopmental Biology
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